Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
ZNF205

Cell type

Cell type Class
Liver
Cell type
Hep G2
Primary Tissue
Liver
Tissue Diagnosis
Carcinoma Hepatocellular

Attributes by original data submitter

Sample

sample type
cell line
cell line
HepG2
sex
male
health state
hepatocellular carcinoma
dev_stage
child
age
15 year
donor ID
ENCDO000AAC
lab
Richard Myers, HAIB

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
54154620
Reads aligned (%)
91.5
Duplicates removed (%)
7.2
Number of peaks
11661 (qval < 1E-05)

hg19

Number of total reads
54154620
Reads aligned (%)
90.9
Duplicates removed (%)
8.4
Number of peaks
11296 (qval < 1E-05)

Base call quality data from DBCLS SRA